Class: ssm
State-space model simulation smoother
returns
simulated states (X
= simsmooth(Mdl
,Y
)X
) by applying a simulation smoother to
the time-invariant or time-varying state-space model (Mdl
)
and responses (Y
). That is, the software uses forward
filtering and back sampling to obtain one random path from the posterior
distribution of the states.
returns
simulated states with additional options specified by one or more X
= simsmooth(Mdl
,Y
,Name,Value
)Name,Value
pair
arguments.
Mdl
— Standard state-space modelssm
model objectStandard state-space model, specified as anssm
model
object returned by ssm
or estimate
. A
standard state-space model has finite initial state covariance matrix
elements. That is, Mdl
cannot be a dssm
model object.
If Mdl
is not fully specified (that is, Mdl
contains
unknown parameters), then specify values for the unknown parameters
using the '
Params
'
Name,Value
pair
argument. Otherwise, the software throws an error.
Y
— Observed response dataObserved response data to which Mdl
is fit,
specified as a numeric matrix or a cell vector of numeric vectors.
If Mdl
is time invariant with respect
to the observation equation, then Y
is a T-by-n matrix,
where each row corresponds to a period and each column corresponds
to a particular observation in the model. T is
the sample size and m is the number of observations
per period. The last row of Y
contains the latest
observations.
If Mdl
is time varying with respect
to the observation equation, then Y
is a T-by-1
cell vector. Each element of the cell vector corresponds to a period
and contains an nt-dimensional
vector of observations for that period. The corresponding dimensions
of the coefficient matrices in Mdl.C{t}
and Mdl.D{t}
must
be consistent with the matrix in Y{t}
for all periods.
The last cell of Y
contains the latest observations.
NaN
elements indicate missing observations.
For details on how the Kalman filter accommodates missing observations,
see Algorithms.
Specify optional
comma-separated pairs of Name,Value
arguments. Name
is
the argument name and Value
is the corresponding value.
Name
must appear inside quotes. You can specify several name and value
pair arguments in any order as
Name1,Value1,...,NameN,ValueN
.
'NumOut'
— Number of output arguments of parameter-to-matrix mapping functionNumber of output arguments of the parameter-to-matrix mapping
function for implicitly defined state-space models, specified as the
comma-separated pair consisting of 'NumOut'
and
a positive integer.
If you implicitly define a state-space model and you do not
supply NumOut
, then the software automatically
detects the number of output arguments of the parameter-to-matrix
mapping function. Such detection consumes extra resources, and might
slow the simulation smoother.
For explicitly defined models, the software ignores NumOut
and
displays a warning message.
'NumPaths'
— Number of sample paths to generate variants1
(default) | positive integerNumber of sample paths to generate variants, specified as the
comma-separated pair consisting of 'NumPaths'
and
a positive integer.
Example: 'NumPaths',1000
Data Types: double
'Params'
— Values for unknown parametersValues for unknown parameters in the state-space model, specified as the comma-separated pair consisting of 'Params'
and a numeric vector.
The elements of Params
correspond to the unknown parameters in the state-space model matrices A
, B
, C
, and D
, and, optionally, the initial state mean Mean0
and covariance matrix Cov0
.
If you created Mdl
explicitly (that is, by specifying the matrices without a parameter-to-matrix mapping function), then the software maps the elements of Params
to NaN
s in the state-space model matrices and initial state values. The software searches for NaN
s column-wise following the order A
, B
, C
, D
, Mean0
, and Cov0
.
If you created Mdl
implicitly (that is, by specifying the matrices with a parameter-to-matrix mapping function), then you must set initial parameter values for the state-space model matrices, initial state values, and state types within the parameter-to-matrix mapping function.
If Mdl
contains unknown parameters, then you must specify their values. Otherwise, the software ignores the value of Params
.
Data Types: double
'Tolerance'
— Forecast uncertainty threshold0
(default) | nonnegative scalarForecast uncertainty threshold, specified as the comma-separated
pair consisting of 'Tolerance'
and a nonnegative
scalar.
If the forecast uncertainty for a particular observation is
less than Tolerance
during numerical estimation,
then the software removes the uncertainty corresponding to the observation
from the forecast covariance matrix before its inversion.
It is best practice to set Tolerance
to a
small number, for example, le-15
, to overcome numerical
obstacles during estimation.
Example: 'Tolerance',le-15
Data Types: double
X
— Simulated statesSimulated states, returned as a numeric matrix or cell matrix of vectors.
If Mdl
is a time-invariant model with respect
to the states, then X
is a numObs
-by-m-by-numPaths
array.
That is, each row corresponds to a period, each column corresponds
to a state in the model, and each page corresponds to a sample path.
The last row corresponds to the latest simulated states.
If Mdl
is a time-varying model with respect
to the states, then X
is a numObs
-by-numPaths
cell
matrix of vectors. X{t,j}
contains a vector of
length mt of simulated states
for period t of sample path j.
The last row of X
contains the latest set of simulated
states.
Suppose that a latent process is an AR(1) model. The state equation is
where is Gaussian with mean 0 and standard deviation 1.
Generate a random series of 100 observations from , assuming that the series starts at 1.5.
T = 100; ARMdl = arima('AR',0.5,'Constant',0,'Variance',1); x0 = 1.5; rng(1); % For reproducibility x = simulate(ARMdl,T,'Y0',x0);
Suppose further that the latent process is subject to additive measurement error. The observation equation is
where is Gaussian with mean 0 and standard deviation 0.75. Together, the latent process and observation equations compose a state-space model.
Use the random latent state process (x
) and the observation equation to generate observations.
y = x + 0.75*randn(T,1);
Specify the four coefficient matrices.
A = 0.5; B = 1; C = 1; D = 0.75;
Specify the state-space model using the coefficient matrices.
Mdl = ssm(A,B,C,D)
Mdl = State-space model type: ssm State vector length: 1 Observation vector length: 1 State disturbance vector length: 1 Observation innovation vector length: 1 Sample size supported by model: Unlimited State variables: x1, x2,... State disturbances: u1, u2,... Observation series: y1, y2,... Observation innovations: e1, e2,... State equation: x1(t) = (0.50)x1(t-1) + u1(t) Observation equation: y1(t) = x1(t) + (0.75)e1(t) Initial state distribution: Initial state means x1 0 Initial state covariance matrix x1 x1 1.33 State types x1 Stationary
Mdl
is an ssm
model. Verify that the model is correctly specified using the display in the Command Window. The software infers that the state process is stationary. Subsequently, the software sets the initial state mean and covariance to the mean and variance of the stationary distribution of an AR(1) model.
Simulate one path each of states and observations. Specify that the paths span 100 periods.
simX = simsmooth(Mdl,y);
simX
is a 100-by-1 vector of simulated states.
Plot the true state values with the simulated states.
figure; plot(1:T,x,'-k',1:T,simX,':r','LineWidth',2); title 'True State Values and Simulated States'; xlabel 'Period'; ylabel 'State'; legend({'True state values','Simulated state values'});
By default, simulate
simulates one path for each state in the state-space model. To conduct a Monte Carlo study, specify to simulate a large number of paths using the 'NumPaths'
name-value pair argument.
The simsmooth
function draws random samples from the distribution of smoothed states, or the distribution of a state given all of the data and parameters. This is the definition of posterior distribution of a state. Suppose that a latent process is an AR(1). The state equation is
where is Gaussian with mean 0 and standard deviation 1.
Generate a random series of 100 observations from , assuming that the series starts at 1.5.
T = 100; ARMdl = arima('AR',0.5,'Constant',0,'Variance',1); x0 = 1.5; rng(1); % For reproducibility x = simulate(ARMdl,T,'Y0',x0);
Suppose further that the latent process is subject to additive measurement error. The observation equation is
where is Gaussian with mean 0 and standard deviation 0.75. Together, the latent process and observation equations compose a state-space model.
Use the random latent state process (x
) and the observation equation to generate observations.
y = x + 0.75*randn(T,1);
Specify the four coefficient matrices.
A = 0.5; B = 1; C = 1; D = 0.75;
Specify the state-space model using the coefficient matrices.
Mdl = ssm(A,B,C,D);
Smooth the states of the state space model.
xsmooth = smooth(Mdl,y);
Draw 1000 paths from the posterior distribution of .
N = 1000;
SimX = simsmooth(Mdl,y,'NumPaths',N);
SimX
is a 100
-by- 1
-by- 1000
array. Rows correspond to periods, columns correspond to individual states, and leaves correspond to separate paths.
Because SimX
has a singleton dimension, collapse it so that its leaves correspond to the columns using squeeze
.
SimX = squeeze(SimX);
Compute the mean, standard deviation, and 95% confidence intervals of the state at each period.
xbar = mean(SimX,2); xstd = std(SimX,[],2); ci = [xbar - 1.96*xstd, xbar + 1.96*xstd];
Plot the smoothed states, and the means and 95% confidence intervals of the draws at each period.
figure; plot(xsmooth,'k','LineWidth',2); hold on; plot(xbar,'--r','LineWidth',2); plot(1:T,ci(:,1),'--r',1:T,ci(:,2),'--r'); legend('Smoothed states','Simulation Mean','95% CIs'); title('Smooth States and Simulation Statistics'); xlabel('Period')
The simulation smoother is an algorithm for drawing samples from the conditional, joint, posterior distribution of the states given the complete observed response series. You can use these random draws to conduct a simulation study of the estimators.
For a univariate, time-invariant state-space model, the simulation smoother algorithm follows these steps.
Obtains the smoothed states () using the Kalman filter.
Chooses initial state mean and variance values. Draw the initial random state from the Gaussian distribution with the initial state mean and variance.
Randomly generates T state disturbances and observation innovations from the standard normal distribution. Denote the random variants for period t and , respectively.
Creates random observations and states by plugging and into the state-space model
Obtains smoothed states () by applying the Kalman filter to the state-space model using the observation series .
Obtains the random path of smoothed states from the posterior distribution using
For more details, see [1].
For increased speed in simulating states, the simulation smoother implements minimal dimensionality error checking. Therefore, for models with unknown parameter values, you should ensure that the dimensions of the data and the dimensions of the coefficient matrices are consistent.
[1] Durbin J., and S. J. Koopman. “A Simple and Efficient Simulation Smoother for State Space Time Series Analysis.” Biometrika. Vol 89., No. 3, 2002, pp. 603–615.
[2] Durbin J., and S. J. Koopman. Time Series Analysis by State Space Methods. 2nd ed. Oxford: Oxford University Press, 2012.
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