Find local maxima
returns
a vector with the local maxima (peaks) of the input signal vector, pks
= findpeaks(data
)data
.
A local peak is a data sample that is either
larger than its two neighboring samples or is equal to Inf
.
Non-Inf
signal endpoints are excluded. If a peak
is flat, the function returns only the point with the lowest index.
[___] = findpeaks(___,
specifies
options using name-value pair arguments in addition to any of the
input arguments in previous syntaxes.Name,Value
)
findpeaks(___)
without output
arguments plots the signal and overlays the peak values.
Define a vector with three peaks and plot it.
data = [25 8 15 5 6 10 10 3 1 20 7]; plot(data)
Find the local maxima. The peaks are output in order of occurrence. The first sample is not included despite being the maximum. For the flat peak, the function returns only the point with lowest index.
pks = findpeaks(data)
pks = 1×3
15 10 20
Use findpeaks
without output arguments to display the peaks.
findpeaks(data)
Create a signal that consists of a sum of bell curves. Specify the location, height, and width of each curve.
x = linspace(0,1,1000); Pos = [1 2 3 5 7 8]/10; Hgt = [3 4 4 2 2 3]; Wdt = [2 6 3 3 4 6]/100; for n = 1:length(Pos) Gauss(n,:) = Hgt(n)*exp(-((x - Pos(n))/Wdt(n)).^2); end PeakSig = sum(Gauss);
Plot the individual curves and their sum.
plot(x,Gauss,'--',x,PeakSig)
Use findpeaks
with default settings to find the peaks of the signal and their locations.
[pks,locs] = findpeaks(PeakSig,x);
Plot the peaks using findpeaks
and label them.
findpeaks(PeakSig,x) text(locs+.02,pks,num2str((1:numel(pks))'))
Sort the peaks from tallest to shortest.
[psor,lsor] = findpeaks(PeakSig,x,'SortStr','descend'); findpeaks(PeakSig,x) text(lsor+.02,psor,num2str((1:numel(psor))'))
Create a signal that consists of a sum of bell curves riding on a full period of a cosine. Specify the location, height, and width of each curve.
x = linspace(0,1,1000); base = 4*cos(2*pi*x); Pos = [1 2 3 5 7 8]/10; Hgt = [3 7 5 5 4 5]; Wdt = [1 3 3 4 2 3]/100; for n = 1:length(Pos) Gauss(n,:) = Hgt(n)*exp(-((x - Pos(n))/Wdt(n)).^2); end PeakSig = sum(Gauss)+base;
Plot the individual curves and their sum.
plot(x,Gauss,'--',x,PeakSig,x,base)
Use findpeaks
to locate and plot the peaks that have a prominence of at least 4.
findpeaks(PeakSig,x,'MinPeakProminence',4,'Annotate','extents')
The highest and lowest peaks are the only ones that satisfy the condition.
Display the prominences and the widths at half prominence of all the peaks.
[pks,locs,widths,proms] = findpeaks(PeakSig,x); widths
widths = 1×6
0.0154 0.0431 0.0377 0.0625 0.0274 0.0409
proms
proms = 1×6
2.6816 5.5773 3.1448 4.4171 2.9191 3.6363
Sunspots are a cyclic phenomenon. Their number is known to peak roughly every 11 years.
Load the file sunspot.dat
, which contains the average number of sunspots observed every year from 1700 to 1987. Find and plot the maxima.
load sunspot.dat
year = sunspot(:,1);
avSpots = sunspot(:,2);
findpeaks(avSpots,year)
Improve your estimate of the cycle duration by ignoring peaks that are very close to each other. Find and plot the peaks again, but now restrict the acceptable peak-to-peak separations to values greater than six years.
findpeaks(avSpots,year,'MinPeakDistance',6)
Use the peak locations returned by findpeaks
to compute the mean interval between maxima.
[pks,locs] = findpeaks(avSpots,year,'MinPeakDistance',6);
meanCycle = mean(diff(locs))
meanCycle = 10.9600
Create a datetime
array using the year data. Assume the sunspots were counted every year on March 20th, close to the vernal equinox. Find the peak sunspot years. Use the years
function to specify the minimum peak separation as a duration
.
ty = datetime(year,3,20); [pk,lk] = findpeaks(avSpots,ty,'MinPeakDistance',years(6)); plot(ty,avSpots,lk,pk,'o')
Compute the mean sunspot cycle using datetime
functionality.
dttmCycle = years(mean(diff(lk)))
dttmCycle = 10.9600
Create a timetable with the data. Specify the time variable in years. Plot the data. Show the last five entries of the timetable.
TT = timetable(years(year),avSpots); plot(TT.Time,TT.Variables)
entries = TT(end-4:end,:)
entries=5×1 timetable
Time avSpots
________ _______
1983 yrs 66.6
1984 yrs 45.9
1985 yrs 17.9
1986 yrs 13.4
1987 yrs 29.3
Load an audio signal sampled at 7418 Hz. Select 200 samples.
load mtlb
select = mtlb(1001:1200);
Find the peaks that are separated by at least 5 ms.
To apply this constraint, findpeaks
chooses the tallest peak in the signal and eliminates all peaks within 5 ms of it. The function then repeats the procedure for the tallest remaining peak and iterates until it runs out of peaks to consider.
findpeaks(select,Fs,'MinPeakDistance',0.005)
Find the peaks that have an amplitude of at least 1 V.
findpeaks(select,Fs,'MinPeakHeight',1)
Find the peaks that are at least 1 V higher than their neighboring samples.
findpeaks(select,Fs,'Threshold',1)
Find the peaks that drop at least 1 V on either side before the signal attains a higher value.
findpeaks(select,Fs,'MinPeakProminence',1)
Sensors can return clipped readings if the data are larger than a given saturation point. You can choose to disregard these peaks as meaningless or incorporate them to your analysis.
Generate a signal that consists of a product of trigonometric functions of frequencies 5 Hz and 3 Hz embedded in white Gaussian noise of variance 0.1². The signal is sampled for one second at a rate of 100 Hz. Reset the random number generator for reproducible results.
rng default
fs = 1e2;
t = 0:1/fs:1-1/fs;
s = sin(2*pi*5*t).*sin(2*pi*3*t)+randn(size(t))/10;
Simulate a saturated measurement by truncating every reading that is greater than a specified bound of 0.32. Plot the saturated signal.
bnd = 0.32;
s(s>bnd) = bnd;
plot(t,s)
xlabel('Time (s)')
Locate the peaks of the signal. findpeaks
reports only the rising edge of each flat peak.
[pk,lc] = findpeaks(s,t); hold on plot(lc,pk,'x')
Use the 'Threshold'
name-value pair to exclude the flat peaks. Require a minimum amplitude difference of between a peak and its neighbors.
[pkt,lct] = findpeaks(s,t,'Threshold',1e-4); plot(lct,pkt,'o','MarkerSize',12)
Create a signal that consists of a sum of bell curves. Specify the location, height, and width of each curve.
x = linspace(0,1,1000); Pos = [1 2 3 5 7 8]/10; Hgt = [4 4 2 2 2 3]; Wdt = [3 8 4 3 4 6]/100; for n = 1:length(Pos) Gauss(n,:) = Hgt(n)*exp(-((x - Pos(n))/Wdt(n)).^2); end PeakSig = sum(Gauss);
Plot the individual curves and their sum.
plot(x,Gauss,'--',x,PeakSig)
grid
Measure the widths of the peaks using the half prominence as reference.
findpeaks(PeakSig,x,'Annotate','extents')
Measure the widths again, this time using the half height as reference.
findpeaks(PeakSig,x,'Annotate','extents','WidthReference','halfheight') title('Signal Peak Widths')
data
— Input dataInput data, specified as a vector. data
must
be real and must have at least three elements.
Data Types: double
| single
x
— Locationsdatetime
arrayLocations, specified as a vector or a datetime
array. x
must
increase monotonically and have the same length as data
.
If x
is omitted, then the indices of data
are
used as locations.
Data Types: double
| single
| datetime
Fs
— Sample rateSample rate, specified as a positive scalar. The sample rate is the number of samples per unit time. If the unit of time is seconds, the sample rate has units of hertz.
Data Types: double
| single
Specify optional
comma-separated pairs of Name,Value
arguments. Name
is
the argument name and Value
is the corresponding value.
Name
must appear inside quotes. You can specify several name and value
pair arguments in any order as
Name1,Value1,...,NameN,ValueN
.
'SortStr','descend','NPeaks',3
finds
the three tallest peaks of the signal.'NPeaks'
— Maximum number of peaksMaximum number of peaks to return, specified as the comma-separated
pair consisting of 'NPeaks'
and a positive integer
scalar. findpeaks
operates from the first element
of the input data and terminates when the number of peaks reaches
the value of 'NPeaks'
.
Data Types: double
| single
'SortStr'
— Peak sorting'none'
(default) | 'ascend'
| 'descend'
Peak sorting, specified as the comma-separated pair consisting
of 'SortStr'
and one of these values:
'none'
returns the peaks in the
order in which they occur in the input data.
'ascend'
returns the peaks in ascending
or increasing order, from the smallest to the largest value.
'descend'
returns the peaks in
descending order, from the largest to the smallest value.
'MinPeakHeight'
— Minimum peak height-Inf
(default) | real scalarMinimum peak height, specified as the comma-separated pair consisting
of 'MinPeakHeight'
and a real scalar. Use this
argument to have findpeaks
return only those peaks
higher than 'MinPeakHeight'
. Specifying a minimum
peak height can reduce processing time.
Data Types: double
| single
'MinPeakProminence'
— Minimum peak prominenceMinimum peak prominence, specified as the comma-separated pair consisting of
'MinPeakProminence'
and a real scalar. Use this
argument to have findpeaks
return only those peaks
that have a relative importance of at least
'MinPeakProminence'
. For more information, see
Prominence.
Data Types: double
| single
'Threshold'
— Minimum height differenceMinimum height difference between a peak and its neighbors,
specified as the comma-separated pair consisting of 'Threshold'
and
a nonnegative real scalar. Use this argument to have findpeaks
return
only those peaks that exceed their immediate neighboring values by
at least the value of 'Threshold'
.
Data Types: double
| single
'MinPeakDistance'
— Minimum peak separationMinimum peak separation, specified as the comma-separated pair
consisting of 'MinPeakDistance'
and a positive
real scalar. When you specify a value for 'MinPeakDistance'
,
the algorithm chooses the tallest peak in the signal and ignores all
peaks within 'MinPeakDistance'
of it. The function
then repeats the procedure for the tallest remaining peak and iterates
until it runs out of peaks to consider.
If you specify a location vector, x
,
then 'MinPeakDistance'
must be expressed in terms
of x
. If x
is a datetime
array,
then specify 'MinPeakDistance'
as a duration
scalar
or as a numeric scalar expressed in days.
If you specify a sample rate, Fs
,
then 'MinPeakDistance'
must be expressed in units
of time.
If you specify neither x
nor Fs
,
then 'MinPeakDistance'
must be expressed in units
of samples.
Use this argument to have findpeaks
ignore
small peaks that occur in the neighborhood of a larger peak.
Data Types: double
| single
| duration
'WidthReference'
— Reference height for width measurements'halfprom'
(default) | 'halfheight'
Reference height for width measurements, specified as the comma-separated
pair consisting of 'WidthReference'
and either 'halfprom'
or 'halfheight'
. findpeaks
estimates
the width of a peak as the distance between the points where the descending
signal intercepts a horizontal reference line. The height of the line
is selected using the criterion specified in 'WidthReference'
:
'halfprom'
positions the reference
line beneath the peak at a vertical distance equal to half the peak
prominence. See Prominence for more
information.
'halfheight'
positions the reference
line at one-half the peak height. The line is truncated if any of
its intercept points lie beyond the borders of the peaks selected
by setting 'MinPeakHeight'
, 'MinPeakProminence'
,
and 'Threshold'
. The border between peaks is defined
by the horizontal position of the lowest valley between them. Peaks
with height less than zero are discarded.
The locations of the intercept points are computed by linear interpolation.
'MinPeakWidth'
— Minimum peak widthMinimum peak width, specified as the comma-separated pair consisting
of 'MinPeakWidth'
and a positive real scalar. Use
this argument to select only those peaks that have widths of at least 'MinPeakWidth'
.
If you specify a location vector, x
,
then 'MinPeakWidth'
must be expressed in terms
of x
. If x
is a datetime
array,
then specify 'MinPeakWidth'
as a duration
scalar
or as a numeric scalar expressed in days.
If you specify a sample rate, Fs
,
then 'MinPeakWidth'
must be expressed in units
of time.
If you specify neither x
nor Fs
,
then 'MinPeakWidth'
must be expressed in units
of samples.
Data Types: double
| single
| duration
'MaxPeakWidth'
— Maximum peak widthInf
(default) | positive real scalarMaximum peak width, specified as the comma-separated pair consisting
of 'MaxPeakWidth'
and a positive real scalar. Use
this argument to select only those peaks that have widths of at most 'MaxPeakWidth'
.
If you specify a location vector, x
,
then 'MaxPeakWidth'
must be expressed in terms
of x
. If x
is a datetime
array,
then specify 'MaxPeakWidth'
as a duration
scalar
or as a numeric scalar expressed in days.
If you specify a sample rate, Fs
,
then 'MaxPeakWidth'
must be expressed in units
of time.
If you specify neither x
nor Fs
,
then 'MaxPeakWidth'
must be expressed in units
of samples.
Data Types: double
| single
| duration
'Annotate'
— Plot style'peaks'
(default) | 'extents'
Plot style, specified as the comma-separated pair consisting
of 'Annotate'
and one of these values:
'peaks'
plots the signal and annotates
the location and value of every peak.
'extents'
plots the signal and
annotates the location, value, width, and prominence of every peak.
This argument is ignored if you call findpeaks
with
output arguments.
pks
— Local maximaLocal maxima, returned as a vector of signal values. If there
are no local maxima, then pks
is empty.
locs
— Peak locationsPeak locations, returned as a vector.
If you specify a location vector, x
,
then locs
contains the values of x
at
the peak indices.
If you specify a sample rate, Fs
, then
locs
is a numeric vector of time
instants with a time difference of 1/Fs
between consecutive samples.
If you specify neither x
nor Fs
,
then locs
is a vector of integer indices.
w
— Peak widthsPeak widths, returned as a vector of real numbers. The width
of each peak is computed as the distance between the points to the
left and right of the peak where the signal intercepts a reference
line whose height is specified by WidthReference
.
The points themselves are found by linear interpolation.
p
— Peak prominencesPeak prominences, returned as a vector of real numbers. The prominence of a peak is the minimum vertical distance that the signal must descend on either side of the peak before either climbing back to a level higher than the peak or reaching an endpoint. See Prominence for more information.
The prominence of a peak measures how much the peak stands out due to its intrinsic height and its location relative to other peaks. A low isolated peak can be more prominent than one that is higher but is an otherwise unremarkable member of a tall range.
To measure the prominence of a peak:
Place a marker on the peak.
Extend a horizontal line from the peak to the left and right until the line does one of the following:
Crosses the signal because there is a higher peak
Reaches the left or right end of the signal
Find the minimum of the signal in each of the two intervals defined in Step 2. This point is either a valley or one of the signal endpoints.
The higher of the two interval minima specifies the reference level. The height of the peak above this level is its prominence.
findpeaks
makes no assumption about the behavior
of the signal beyond its endpoints, whatever their height. This is
reflected in Steps 2 and 4 and often
affects the value of the reference level. Consider for example the
peaks of this signal:
Peak Number | Left Interval Lies Between Peak and | Right Interval Lies Between Peak and | Lowest Point on the Left Interval | Lowest Point on the Right Interval | Reference Level (Highest Minimum) |
---|---|---|---|---|---|
1 | Left end | Crossing due to peak 2 | Left endpoint | a | a |
2 | Left end | Right end | Left endpoint | h | Left endpoint |
3 | Crossing due to peak 2 | Crossing due to peak 4 | b | c | c |
4 | Crossing due to peak 2 | Crossing due to peak 6 | b | d | b |
5 | Crossing due to peak 4 | Crossing due to peak 6 | d | e | e |
6 | Crossing due to peak 2 | Right end | d | h | d |
7 | Crossing due to peak 6 | Crossing due to peak 8 | f | g | g |
8 | Crossing due to peak 6 | Right end | f | h | f |
9 | Crossing due to peak 8 | Crossing due to right endpoint | h | i | i |
fminbnd
| fminsearch
| fzero
| islocalmax
| islocalmin
| max
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