Get specific parameters in kinetic law object
parameterObj =
getparameters(kineticlawObj)
parameterObj =
getparameters(kineticlawObj, 'ParameterVariablesValue')
| Retrieve parameters used by the kinetic law object. |
| Retrieve parameters used by the kinetic law object corresponding
to the specified parameter in the ParameterVariables property
of the kinetic law object. |
parameterObj =
getparameters(kineticlawObj)kineticlawObj to parameterObj.
parameterObj =
getparameters(kineticlawObj, 'ParameterVariablesValue')ParameterVariableNames property
that corresponds to the parameter specified in the ParameterVariables property
of kineticlawObj, to parameterObj. ParameterVariablesValue is
the name of the parameter as it appears in the ParameterVariables property
of kineticlawObj. ParameterVariablesValue can
be a cell array of character vectors.
If you change the name of a parameter, you must configure all
applicable elements such as rules that use the parameter, any user-specified ReactionRate,
or the kinetic law object property ParameterVariableNames.
Use the method setparameter to configure ParameterVariableNames.
Create a model, add a reaction, and assign the ParameterVariableNames for
the reaction rate equation.
Create the model object, and then add a reaction object.
modelObj = sbiomodel('my_model'); reactionObj = addreaction(modelObj, 'a -> c + d');
Create a kinetic law object for the reaction object,
of the type 'Henri-Michaelis-Menten'.
kineticlawObj = addkineticlaw(reactionObj, 'Henri-Michaelis-Menten');Add two parameter objects.
parameterObj1 = addparameter(kineticlawObj,'Va'); parameterObj2 = addparameter(kineticlawObj,'Ka');
The 'Henri-Michaelis-Menten' kinetic
law has two parameter variables (Vm and Km)
that should to be set. To set these variables:
setparameter(kineticlawObj,'Vm', 'Va'); setparameter(kineticlawObj,'Km', 'Ka');
To retrieve a parameter variable:
parameterObj3 = getparameters(kineticlawObj, 'Vm')MATLAB returns:
SimBiology Parameter Array Index: Name: Value: ValueUnits: 1 Va 1
parameterObj4 = getparameters (kineticlawObj, 'Km')