ó
ÊïLc           @   sƒ   d  Z  d d l m Z d d l m Z d d l Z d d l Z d d l Z d d l m	 Z	 d d l
 Z
 d e
 j f d „  ƒ  YZ d S(   s³   
This module allows to cache Simcoal2 results, and return on the fly
in case the calculation was done. Async version

This version will run Sincoal2 (if necessary) Asynchrously.

iÿÿÿÿ(   t   debug(   t   exitN(   t   SimCoalControllert   SimCoalCachec           B   s   e  Z d  „  Z d „  Z RS(   c         C   s#   | |  _  t j j |  | | ƒ d  S(   N(   t   data_dirt   CacheR   t   __init__(   t   selfR   t   simcoal_dir(    (    s9   C:\Python27\Lib\site-packages\Bio\PopGen\SimCoal\Async.pyR      s    	c   	      C   sž   | d } | d } | j  d d ƒ } | | } | j ƒ  } | j ƒ  t t j j |  j d d | g ƒ d ƒ } | j | ƒ | j ƒ  |  j	 | | | ƒ d	 S(
   Nt   parFilet   numSimst   ploydit   1t   SimCoalt   runst   wi    (   i    N(   t   gett   readt   closet   opent   ost   sept   joinR   t   writet   run_simcoalt   None(	   R   t
   parameterst
   inputFilesR	   R
   R   t   ft   textR   (    (    s9   C:\Python27\Lib\site-packages\Bio\PopGen\SimCoal\Async.pyt   runJob   s    



*
(   t   __name__t
   __module__R   R   (    (    (    s9   C:\Python27\Lib\site-packages\Bio\PopGen\SimCoal\Async.pyR      s   	(   t   __doc__t   loggingR    t   sysR   R   t   tarfilet   tempfilet
   ControllerR   R   R   (    (    (    s9   C:\Python27\Lib\site-packages\Bio\PopGen\SimCoal\Async.pyt   <module>	   s   